STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTBEP00000001729annotation not available (546 aa)    
Predicted Functional Partners:
ENSTBEP00000001316
annotation not available
 
     0.951
ENSTBEP00000000450
annotation not available
  
 0.759
SF3B1
Splicing factor 3b subunit 1.
   
 0.746
RBM8A
RNA binding motif protein 8A.
    
 0.731
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.727
DDX52
DExD-box helicase 52.
  
 0.713
PATL1
PAT1 homolog 1, processing body mRNA decay factor.
    
 0.711
PRPF6
pre-mRNA processing factor 6.
    
 0.706
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
 0.705
SF3B3
Splicing factor 3b subunit 3.
    
 0.704
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.