STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIF1PIF1 5'-to-3' DNA helicase. (555 aa)    
Predicted Functional Partners:
PCNA
Proliferating cell nuclear antigen.
  
 
 0.933
ORC5
Origin recognition complex subunit 5.
    
 
 0.910
ENSTBEP00000008816
annotation not available
    
 
 0.868
ENSTBEP00000011064
annotation not available
  
 
 0.826
ASF1A
Anti-silencing function 1A histone chaperone.
   
 
 0.821
ASF1B
Anti-silencing function 1B histone chaperone.
   
 
 0.821
FANCM
FA complementation group M.
   
 
 0.820
BLM
BLM RecQ like helicase.
  
 
 0.818
ENSTBEP00000010383
annotation not available
   
  
 0.806
ENSTBEP00000006684
annotation not available
    
 
 0.801
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.