Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F5Coagulation factor V. (1795 aa)    
Predicted Functional Partners:
F2
Coagulation factor II, thrombin.
   
 0.996
PROC
Protein C, inactivator of coagulation factors Va and VIIIa.
   
 0.993
PROS1
Protein S.
   
 0.986
F9
Coagulation factor IX.
   
 0.975
LMAN1
Lectin, mannose binding 1.
    
 0.870
VWF
Von Willebrand factor.
    
 0.844
ENSTBEP00000002936
annotation not available
    
 0.843
ENSTBEP00000007747
annotation not available
    
 0.843
F13B
Coagulation factor XIII B chain.
   
 
 0.831
F8
Coagulation factor VIII.
     
 0.783
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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