STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUV39H1Suppressor of variegation 3-9 homolog 1. (361 aa)    
Predicted Functional Partners:
CBX5
Chromobox 5.
   
 0.964
CDYL2
Chromodomain Y like 2.
   
 0.961
CDYL
Chromodomain Y like.
   
 0.961
CBX1
Chromobox 1.
   
 0.956
ENSTBEP00000004827
annotation not available
  
  0.949
ENSTBEP00000008437
annotation not available
 
  
 0.927
SETDB1
SET domain bifurcated histone lysine methyltransferase 1.
    
0.916
SIRT1
Sirtuin 1.
    
 0.892
HDAC1
Histone deacetylase 1.
  
 0.864
RRP8
Ribosomal RNA processing 8.
   
 0.863
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.