STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNOT4CCR4-NOT transcription complex subunit 4. (772 aa)    
Predicted Functional Partners:
CNOT1
CCR4-NOT transcription complex subunit 1.
    
 0.996
CNOT9
CCR4-NOT transcription complex subunit 9.
    
 0.996
ENSTBEP00000005946
annotation not available
    
 0.995
ENSTBEP00000008330
annotation not available
   
 0.994
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 0.992
ENSTBEP00000000898
annotation not available
    
 0.963
ENSTBEP00000002702
annotation not available
    
 0.963
MTREX
Mtr4 exosome RNA helicase.
    
 
 0.959
PATL1
PAT1 homolog 1, processing body mRNA decay factor.
    
 
 0.951
ENSTBEP00000011439
annotation not available
    
   0.948
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.