STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRFProtein tyrosine phosphatase receptor type F. (1778 aa)    
Predicted Functional Partners:
PPFIA3
PTPRF interacting protein alpha 3.
    
 0.976
NTRK3
Neurotrophic receptor tyrosine kinase 3.
    
 0.942
ENSTBEP00000004418
annotation not available
    
 0.925
LRFN5
Leucine rich repeat and fibronectin type III domain containing 5.
    
 0.917
CTNNB1
Catenin beta 1.
   
 0.906
SLITRK1
SLIT and NTRK like family member 1.
    
 0.904
ENSTBEP00000004840
annotation not available
    
 0.900
IL1RAPL1
Interleukin 1 receptor accessory protein like 1.
    
 0.896
NTRK1
Neurotrophic receptor tyrosine kinase 1.
    
 0.892
LRFN1
Leucine rich repeat and fibronectin type III domain containing 1.
    
 0.878
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.