STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRAM1PML-RARA regulated adaptor molecule 1. (593 aa)    
Predicted Functional Partners:
NSMCE4A
NSE4 homolog A, SMC5-SMC6 complex component.
   
 0.866
NSMCE1
NSE1 homolog, SMC5-SMC6 complex component.
    
 0.861
SMC6
Structural maintenance of chromosomes 6.
    
 0.858
NSMCE2
NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.
    
 0.857
SMC5
Structural maintenance of chromosomes 5.
    
 0.857
SMC3
Structural maintenance of chromosomes 3.
    
 0.688
ENSTBEP00000009298
annotation not available
    
 0.686
SMC1A
Structural maintenance of chromosomes 1A.
    
 0.642
SMC1B
Structural maintenance of chromosomes 1B.
    
 0.642
SMC4
Structural maintenance of chromosomes 4.
    
 0.633
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.