STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MINDY1MINDY lysine 48 deubiquitinase 1. (491 aa)    
Predicted Functional Partners:
ENSTBEP00000002195
annotation not available
    
 0.754
SETD3
SET domain containing 3, actin histidine methyltransferase.
    
 0.754
ENSTBEP00000003983
annotation not available
    
   0.707
ACHE
Acetylcholinesterase (Cartwright blood group).
     
 0.588
BCHE
Butyrylcholinesterase.
     
 0.588
ENSTBEP00000005397
annotation not available
    
  0.552
PJA2
Praja ring finger ubiquitin ligase 2.
    
 0.534
RNF215
Ring finger protein 215.
    
  0.526
ENSTBEP00000014278
annotation not available
    
  0.526
UBL4A
Ubiquitin like 4A.
    
   0.523
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.