Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSTBEP00000002139annotation not available (674 aa)    
Predicted Functional Partners:
RPL3
Ribosomal protein L3.
   
 0.955
ENSTBEP00000000692
annotation not available
   
  0.950
ENSTBEP00000013514
annotation not available
   
  0.922
SERBP1
SERPINE1 mRNA binding protein 1.
   
 
 0.921
LARP7
La ribonucleoprotein 7, transcriptional regulator.
    
 0.920
RPL11
Ribosomal protein L11.
   
 0.915
HNRNPD
Heterogeneous nuclear ribonucleoprotein D.
   
 0.910
STAU1
Staufen double-stranded RNA binding protein 1.
    
 
 0.903
ENSTBEP00000010189
annotation not available
    
 
 0.902
NOP58
NOP58 ribonucleoprotein.
   
 0.899
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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