STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATL2Atlastin GTPase 2. (543 aa)    
Predicted Functional Partners:
RTN2
Reticulon 2.
    
 
 0.606
REEP1
Receptor accessory protein 1.
    
 
 0.592
ENSTBEP00000000841
annotation not available
    
 
 0.583
RTN3
Reticulon 3.
    
 
 0.583
RTN4
Reticulon 4.
    
 
 0.522
ENSTBEP00000010475
annotation not available
   
 
 0.506
ARL6IP1
ADP ribosylation factor like GTPase 6 interacting protein 1.
    
 
 0.468
ARL14
ADP ribosylation factor like GTPase 14.
    
 
 0.434
ENSTBEP00000003400
annotation not available
    
 
 0.433
ENSTBEP00000013034
annotation not available
    
 
 0.433
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.