STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CGNL1Cingulin like 1. (1302 aa)    
Predicted Functional Partners:
ARHGEF2
Rho/Rac guanine nucleotide exchange factor 2.
     
 0.904
TRAPPC1
Trafficking protein particle complex 1.
    
 0.904
TRAPPC4
Trafficking protein particle complex 4.
    
 0.892
ENSTBEP00000002694
annotation not available
    
 0.889
TRAPPC6B
Trafficking protein particle complex 6B.
    
 0.889
TJP1
Tight junction protein 1.
    
 0.878
TRAPPC3L
Trafficking protein particle complex 3 like.
    
 0.862
TRAPPC3
Trafficking protein particle complex 3.
    
 0.862
USO1
USO1 vesicle transport factor.
   
 0.861
ENSTBEP00000009963
annotation not available
    
 0.861
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.