STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL17A1Collagen type XVII alpha 1 chain. (1507 aa)    
Predicted Functional Partners:
ENSTBEP00000013672
annotation not available
   
 0.880
ITGA6
Integrin subunit alpha 6.
    
 0.797
ENSTBEP00000012831
annotation not available
    
 0.790
ENSTBEP00000006126
annotation not available
     
 0.785
MACF1
Microtubule actin crosslinking factor 1.
    
 0.741
DST
Dystonin.
    
 0.741
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
   
 0.734
LAMA3
Laminin subunit alpha 3.
   
 0.725
ENSTBEP00000003198
annotation not available
   
 0.722
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 0.721
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.