STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPLOC4NPL4 homolog, ubiquitin recognition factor. (580 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
   
 0.999
ENSTBEP00000010294
annotation not available
    
 0.999
VCP
Valosin containing protein.
   
 0.998
ENSTBEP00000003983
annotation not available
   
 0.979
FAAP24
FA core complex associated protein 24.
    
 0.978
FANCL
FA complementation group L.
    
 0.978
ENSTBEP00000004920
annotation not available
    
 0.978
FANCC
FA complementation group C.
    
 0.978
ENSTBEP00000009902
annotation not available
    
 0.978
FANCB
FA complementation group B.
    
 0.978
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.