STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUS3Pseudouridine synthase 3. (455 aa)    
Predicted Functional Partners:
TRUB1
TruB pseudouridine synthase family member 1.
  
 0.876
POLR1C
RNA polymerase I and III subunit C.
  
  
 0.872
POLR2C
RNA polymerase II subunit C.
  
  
 0.872
TRUB2
TruB pseudouridine synthase family member 2.
  
 0.858
DKC1
Dyskerin pseudouridine synthase 1.
  
 0.843
ENSTBEP00000003028
annotation not available
   
 
 0.833
ENSTBEP00000003613
annotation not available
  
 
 0.814
ENSTBEP00000007501
annotation not available
   
    0.805
METTL15
Methyltransferase like 15.
   
 
 0.798
RPF2
Ribosome production factor 2 homolog.
   
    0.782
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.