STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PACS1Phosphofurin acidic cluster sorting protein 1. (949 aa)    
Predicted Functional Partners:
WDR37
WD repeat domain 37.
    
 
 0.937
ENSTBEP00000004930
annotation not available
    
 
 0.593
ENSTBEP00000010878
annotation not available
      
 0.549
PDZD8
PDZ domain containing 8.
      
 0.489
ENSTBEP00000012711
annotation not available
      
 0.487
VAPB
VAMP associated protein B and C.
      
 0.483
PKD2
Polycystin 2, transient receptor potential cation channel.
      
 0.472
ENSTBEP00000011998
annotation not available
      
 0.471
ENSTBEP00000001515
annotation not available
      
 0.434
SORL1
Sortilin related receptor 1.
    
 
 0.427
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.