STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHGDHPhosphoglycerate dehydrogenase. (533 aa)    
Predicted Functional Partners:
PSAT1
Phosphoserine aminotransferase 1.
  
 0.994
AMT
Aminomethyltransferase.
  
 0.918
ENSTBEP00000010727
annotation not available
  
 0.918
GLDC
Glycine decarboxylase.
  
 
 0.904
ENSTBEP00000000041
annotation not available
    
 0.900
SHMT1
Serine hydroxymethyltransferase 1.
  
 0.899
SHMT2
Serine hydroxymethyltransferase 2.
  
 0.899
DMGDH
Dimethylglycine dehydrogenase.
  
 0.889
TYMS
Thymidylate synthetase.
  
 0.880
PDHA1
Pyruvate dehydrogenase E1 alpha 1 subunit.
  
 
 0.871
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.