STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MFAP1Microfibril associated protein 1. (339 aa)    
Predicted Functional Partners:
PRPF38A
pre-mRNA processing factor 38A.
   
 0.997
PRPF6
pre-mRNA processing factor 6.
   
 0.994
SMU1
SMU1 DNA replication regulator and spliceosomal factor.
   
 0.990
ENSTBEP00000007355
annotation not available
   
 0.987
PRPF8
pre-mRNA processing factor 8.
   
 
 0.986
ZMAT2
Zinc finger matrin-type 2.
   
 0.986
TCERG1
Transcription elongation regulator 1.
   
 0.986
PRPF4
pre-mRNA processing factor 4.
 
 
  0.985
SF3B1
Splicing factor 3b subunit 1.
   
 
 0.985
TCERG1L
Transcription elongation regulator 1 like.
   
 0.983
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.