STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTBEP00000004388annotation not available (1072 aa)    
Predicted Functional Partners:
COL1A2
Collagen type I alpha 2 chain.
   
 0.837
COL3A1
Collagen type III alpha 1 chain.
   
 0.728
COL5A2
Collagen type V alpha 2 chain.
   
 0.698
COL11A1
Collagen type XI alpha 1 chain.
   
 0.578
B3GLCT
Beta 3-glucosyltransferase.
    
 0.555
COL2A1
Collagen type II alpha 1 chain.
   
 0.547
SVEP1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
   
 0.533
FBN1
Fibrillin 1.
   
 0.501
ADAMTS8
ADAM metallopeptidase with thrombospondin type 1 motif 8.
     
0.493
ENSTBEP00000013359
annotation not available
    
 0.481
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.