STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALX1ALX homeobox 1. (326 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 0.627
LDB2
LIM domain binding 2.
    
 0.627
TCF12
Transcription factor 12.
    
  0.548
TCF4
Transcription factor 4.
    
  0.548
ENSTBEP00000005279
annotation not available
    
 0.532
TRPS1
Transcriptional repressor GATA binding 1.
    
 0.532
GATA3
GATA binding protein 3.
    
 0.532
HAND2
Heart and neural crest derivatives expressed 2.
    
 0.523
PTF1A
Pancreas associated transcription factor 1a.
   
 0.504
MSGN1
Mesogenin 1.
    
 0.495
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.