Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PADI2Peptidyl arginine deiminase 2. (665 aa)    
Predicted Functional Partners:
PADI3
Peptidyl arginine deiminase 3.
     
  0.862
PADI1
Peptidyl arginine deiminase 1.
     
  0.862
ENSTBEP00000008174
annotation not available
     
  0.810
ENSTBEP00000008006
annotation not available
     
  0.769
ENSTBEP00000005343
annotation not available
      
 0.577
RSL24D1
Ribosomal L24 domain containing 1.
    
 
 0.577
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
      
 0.570
MMP24
Matrix metallopeptidase 24.
      
 0.565
COMT
catechol-O-methyltransferase.
      
 0.561
POFUT2
Protein O-fucosyltransferase 2.
      
 0.557
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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