STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIN28BLin-28 homolog B. (249 aa)    
Predicted Functional Partners:
NCBP2
Nuclear cap binding protein subunit 2.
   
 0.752
ENSTBEP00000012308
annotation not available
    
  0.730
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.730
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
    
  0.700
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
  
 0.696
NAA38
N(alpha)-acetyltransferase 38, NatC auxiliary subunit.
    
  0.696
NCBP1
Nuclear cap binding protein subunit 1.
    
  0.695
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
    
 0.694
SYMPK
Symplekin.
    
 0.691
MRPS12
Mitochondrial ribosomal protein S12.
  
 
 0.673
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.