STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HPS4HPS4 biogenesis of lysosomal organelles complex 3 subunit 2. (643 aa)    
Predicted Functional Partners:
HGD
Homogentisate 1,2-dioxygenase.
  
 0.981
MCCC2
methylcrotonoyl-CoA carboxylase 2.
  
 
 0.910
ENSTBEP00000000953
annotation not available
  
 
 0.910
TAT
Tyrosine aminotransferase.
  
 
 0.863
HPS1
HPS1 biogenesis of lysosomal organelles complex 3 subunit 1.
     
 0.849
GOT2
Glutamic-oxaloacetic transaminase 2.
  
 
 0.844
GOT1
Glutamic-oxaloacetic transaminase 1.
  
 
 0.839
PC
Pyruvate carboxylase.
  
 
 0.820
NELFCD
Negative elongation factor complex member C/D.
  
 
 0.816
PCCA
propionyl-CoA carboxylase subunit alpha.
  
 
 0.816
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.