STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHDC4KH domain containing 4, pre-mRNA splicing factor. (599 aa)    
Predicted Functional Partners:
ENSTBEP00000008837
annotation not available
   
  
 0.585
SF1
Splicing factor 1.
    
 
 0.567
ENSTBEP00000007370
annotation not available
   
  
 0.531
ENSTBEP00000005952
annotation not available
      
 0.509
CDC5L
Cell division cycle 5 like.
    
 
 0.495
PRPF40B
pre-mRNA processing factor 40 homolog B.
   
 
 0.490
CTNNBL1
Catenin beta like 1.
      
 0.476
WBP4
WW domain binding protein 4.
      
 0.475
CWC15
CWC15 spliceosome associated protein homolog.
      
 0.472
ENSTBEP00000007331
annotation not available
   
  
 0.422
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.