STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBTUB bipartite transcription factor. (559 aa)    
Predicted Functional Partners:
TTC21B
Tetratricopeptide repeat domain 21B.
    
 0.839
WDR19
WD repeat domain 19.
    
 0.827
ENSTBEP00000013713
annotation not available
    
 0.810
TTC21A
Tetratricopeptide repeat domain 21A.
    
 0.759
GPR161
G protein-coupled receptor 161.
     
 0.699
TXNDC9
Thioredoxin domain containing 9.
      
 0.591
ENSTBEP00000014033
annotation not available
    
 
 0.578
ANKRD54
Ankyrin repeat domain 54.
    
   0.534
ENSTBEP00000003534
annotation not available
   
 0.529
LYZ
Lysozyme.
      
 0.528
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.