STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAX8Paired box 8. (452 aa)    
Predicted Functional Partners:
PPARG
Peroxisome proliferator activated receptor gamma.
     
 0.904
PRKACB
Protein kinase cAMP-activated catalytic subunit beta.
     
 0.822
RXRG
Retinoid X receptor gamma.
     
 0.814
RXRB
Retinoid X receptor beta.
     
 0.814
ENSTBEP00000005860
annotation not available
   
 
 0.813
ETS2
ETS proto-oncogene 2, transcription factor.
   
 
 0.804
GSC
Goosecoid homeobox.
    
 
 0.771
PRKCB
Protein kinase C beta.
   
 
 0.755
PRKCA
Protein kinase C alpha.
   
 
 0.755
RUNX1
RUNX family transcription factor 1.
    
 0.732
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.