STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUM2Pumilio RNA binding family member 2. (1057 aa)    
Predicted Functional Partners:
NANOS3
Nanos C2HC-type zinc finger 3.
   
 
 0.946
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 
 0.914
PUM1
Pumilio RNA binding family member 1.
  
0.901
ENSTBEP00000001052
annotation not available
   
 
 0.744
ENSTBEP00000012078
annotation not available
    
 
 0.702
COX17
Cytochrome c oxidase copper chaperone COX17.
    
 
 0.702
NIPBL
NIPBL cohesin loading factor.
   
    0.695
YARS1
tyrosyl-tRNA synthetase 1.
    
 
 0.694
CNOT1
CCR4-NOT transcription complex subunit 1.
   
 
 0.681
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
   
 0.676
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.