STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL4A3Collagen type IV alpha 3 chain. (1619 aa)    
Predicted Functional Partners:
COL4A6
Collagen type IV alpha 6 chain.
  
0.880
ENSTBEP00000004421
annotation not available
  
0.845
ITGA1
Integrin subunit alpha 1.
     
 0.750
ITGB1
Integrin subunit beta 1.
    
 0.730
ITGB6
Integrin subunit beta 6.
    
 0.711
ENSTBEP00000013604
annotation not available
    
 0.695
ITGA3
Integrin subunit alpha 3.
    
 0.694
ITGB5
Integrin subunit beta 5.
    
 0.690
ITGA6
Integrin subunit alpha 6.
    
 0.690
ENSTBEP00000013502
annotation not available
    
 0.690
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.