STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNRPD1Small nuclear ribonucleoprotein D1 polypeptide. (88 aa)    
Predicted Functional Partners:
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.999
ENSTBEP00000012308
annotation not available
   
 0.999
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
0.999
ENSTBEP00000000051
annotation not available
   
 0.998
ENSTBEP00000015110
annotation not available
   
 0.998
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
   
 0.997
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
   
 0.997
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 0.997
PRPF8
pre-mRNA processing factor 8.
   
 0.996
SF3A3
Splicing factor 3a subunit 3.
   
 0.996
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.