STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP20Matrix metallopeptidase 20. (483 aa)    
Predicted Functional Partners:
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.833
TIMP2
TIMP metallopeptidase inhibitor 2.
   
 0.781
MMP14
Matrix metallopeptidase 14.
  
0.727
MMP7
Matrix metallopeptidase 7.
 
 
0.706
SPP1
Secreted phosphoprotein 1.
     
 0.699
MMP1
Matrix metallopeptidase 1.
  
 
0.692
THBS1
Thrombospondin 1.
   
 0.658
ENSTBEP00000002717
annotation not available
     
 0.640
MMP13
Matrix metallopeptidase 13.
  
 
 
0.636
HBEGF
Heparin binding EGF like growth factor.
    
  0.627
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.