STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBR1Ubiquitin protein ligase E3 component n-recognin 1. (1719 aa)    
Predicted Functional Partners:
TRIP12
Thyroid hormone receptor interactor 12.
   
 0.995
UBE2B
Ubiquitin conjugating enzyme E2 B.
    
 
 0.908
UBE2A
Ubiquitin conjugating enzyme E2 A.
    
 
 0.907
ENSTBEP00000003983
annotation not available
   
 0.796
ENSTBEP00000009585
annotation not available
    
 
 0.779
LTN1
Listerin E3 ubiquitin protein ligase 1.
   
 0.767
ZFAND4
Zinc finger AN1-type containing 4.
   
 0.709
RC3H2
Ring finger and CCCH-type domains 2.
   
    0.697
ENSTBEP00000011128
annotation not available
   
    0.689
MARCHF6
Membrane associated ring-CH-type finger 6.
    
 
 0.680
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.