STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RDH12Retinol dehydrogenase 12. (313 aa)    
Predicted Functional Partners:
ALDH1A3
Aldehyde dehydrogenase 1 family member A3.
  
 0.915
ALDH1A1
Aldehyde dehydrogenase 1 family member A1.
  
 0.883
RPE65
Retinoid isomerohydrolase RPE65.
   
 
 0.874
BCO1
Beta-carotene oxygenase 1.
     
 0.868
RDH10
Retinol dehydrogenase 10.
   
 
 0.856
RETSAT
Retinol saturase.
    
 0.846
PNPLA4
Patatin like phospholipase domain containing 4.
     
 0.845
CYP26A1
Cytochrome P450 family 26 subfamily A member 1.
  
 
 0.835
AOX1
Aldehyde oxidase 1.
     
 0.833
ENSTBEP00000008902
annotation not available
  
 0.831
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.