STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYF2SYF2 pre-mRNA splicing factor. (206 aa)    
Predicted Functional Partners:
CDC40
Cell division cycle 40.
    
 0.999
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
    
 0.998
ENSTBEP00000011139
annotation not available
    
 0.997
SLU7
SLU7 homolog, splicing factor.
   
 0.997
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.996
DHX38
DEAH-box helicase 38.
    
 0.994
ENSTBEP00000005978
annotation not available
   
 
 0.992
CWC25
CWC25 spliceosome associated protein homolog.
   
 0.992
ENSTBEP00000005475
annotation not available
    
 0.991
BUD31
BUD31 homolog.
   
 
 0.991
Your Current Organism:
Tupaia belangeri
NCBI taxonomy Id: 37347
Other names: T. belangeri, Tupaia glis belangeri, common tree shrew, northern tree shrew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.