STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_000047Uncharacterized protein. (55 aa)    
Predicted Functional Partners:
PBRA_006116
Uncharacterized protein.
   
 
 0.995
PBRA_007927
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.994
PBRA_002856
L51_S25_CI-B8 domain-containing protein.
   
 
 0.994
PBRA_004280
Uncharacterized protein.
   
 
 0.993
PBRA_008486
Uncharacterized protein.
   
 
 0.993
PBRA_009129
Uncharacterized protein.
   
 
 0.993
PBRA_001556
Uncharacterized protein.
   
   0.992
PBRA_003609
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.991
PBRA_009387
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.991
PBRA_003077
Ribosomal_L18e/L15P domain-containing protein.
   
   0.991
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.