STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_000349NTF2 domain-containing protein. (125 aa)    
Predicted Functional Partners:
PBRA_003384
Uncharacterized protein.
    
 0.999
PBRA_004500
Uncharacterized protein.
    
 0.966
PBRA_009408
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.959
PBRA_002563
Uncharacterized protein.
   
 0.935
PBRA_006212
HHH_2 domain-containing protein.
   
 0.930
PBRA_002599
MPN domain-containing protein.
    
 0.920
PBRA_006995
Uncharacterized protein.
   
 0.915
PBRA_004096
FA_FANCE domain-containing protein.
   
 0.889
PBRA_005516
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 0.889
PBRA_006272
ERCC4 domain-containing protein.
    
 0.881
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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