STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_000354Ribosomal_L28e domain-containing protein. (145 aa)    
Predicted Functional Partners:
PBRA_000109
Uncharacterized protein.
   
 0.999
PBRA_000151
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.999
PBRA_003726
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
   
 0.999
PBRA_003653
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
   
 0.999
PBRA_003874
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.999
PBRA_003927
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 
 0.999
PBRA_003909
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 0.999
PBRA_004142
Uncharacterized protein.
   
 
 0.999
PBRA_004470
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 
 0.999
PBRA_004523
Uncharacterized protein.
   
 0.999
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.