STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_003621UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily. (205 aa)    
Predicted Functional Partners:
PBRA_003680
Uncharacterized protein.
   
 0.873
PBRA_007838
Uncharacterized protein.
   
 0.873
PBRA_007144
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
 
 
 0.802
PBRA_005570
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
   
 0.800
PBRA_004883
ATP synthase subunit gamma.
   
 
 0.794
PBRA_003653
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.777
PBRA_004553
OMPdecase domain-containing protein.
   
 0.777
PBRA_005676
Uncharacterized protein.
   
 
 0.767
PBRA_006628
Uncharacterized protein.
  
 
 0.767
PBRA_001328
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
  
 0.764
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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