STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_009605Uncharacterized protein. (408 aa)    
Predicted Functional Partners:
PBRA_007197
Uncharacterized protein.
   
 0.601
PBRA_009059
Uncharacterized protein.
    
 0.589
PBRA_009564
Uncharacterized protein.
    
 0.529
PBRA_000504
Uncharacterized protein.
    
 0.501
PBRA_007184
Uncharacterized protein.
    
 0.501
PBRA_006424
Uncharacterized protein.
   
 
 0.494
PBRA_006245
Uncharacterized protein.
     
 0.490
PBRA_005337
Uncharacterized protein.
     
 0.479
PBRA_000980
VWFD domain-containing protein.
    
 0.477
PBRA_006845
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
    
 0.477
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.