Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PBRA_000310 | PBRA_000880 | A0A0G4IHB9 | A0A0G4IQU4 | Uncharacterized protein. | DNA polymerase. | 0.999 |
PBRA_000310 | PBRA_009627 | A0A0G4IHB9 | A0A0G4IJ41 | Uncharacterized protein. | Glyco_hydro_114 domain-containing protein. | 0.738 |
PBRA_000880 | PBRA_000310 | A0A0G4IQU4 | A0A0G4IHB9 | DNA polymerase. | Uncharacterized protein. | 0.999 |
PBRA_000880 | PBRA_003384 | A0A0G4IQU4 | A0A0G4J8E1 | DNA polymerase. | Uncharacterized protein. | 0.939 |
PBRA_000880 | PBRA_007608 | A0A0G4IQU4 | A0A0G4IXM6 | DNA polymerase. | ERCC4 domain-containing protein. | 0.783 |
PBRA_000880 | PBRA_009627 | A0A0G4IQU4 | A0A0G4IJ41 | DNA polymerase. | Glyco_hydro_114 domain-containing protein. | 0.702 |
PBRA_001619 | PBRA_003752 | A0A0G4IZ15 | A0A0G4IIE7 | Small nuclear ribonucleoprotein G. | Sm domain-containing protein. | 0.999 |
PBRA_001619 | PBRA_004937 | A0A0G4IZ15 | A0A0G4ILY3 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
PBRA_001619 | PBRA_007984 | A0A0G4IZ15 | A0A0G4IY56 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.991 |
PBRA_001619 | PBRA_008205 | A0A0G4IZ15 | A0A0G4IZU7 | Small nuclear ribonucleoprotein G. | Sm domain-containing protein. | 0.991 |
PBRA_001619 | PBRA_008257 | A0A0G4IZ15 | A0A0G4J034 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
PBRA_001619 | PBRA_009627 | A0A0G4IZ15 | A0A0G4IJ41 | Small nuclear ribonucleoprotein G. | Glyco_hydro_114 domain-containing protein. | 0.676 |
PBRA_003384 | PBRA_000880 | A0A0G4J8E1 | A0A0G4IQU4 | Uncharacterized protein. | DNA polymerase. | 0.939 |
PBRA_003384 | PBRA_007608 | A0A0G4J8E1 | A0A0G4IXM6 | Uncharacterized protein. | ERCC4 domain-containing protein. | 0.999 |
PBRA_003384 | PBRA_009627 | A0A0G4J8E1 | A0A0G4IJ41 | Uncharacterized protein. | Glyco_hydro_114 domain-containing protein. | 0.697 |
PBRA_003752 | PBRA_001619 | A0A0G4IIE7 | A0A0G4IZ15 | Sm domain-containing protein. | Small nuclear ribonucleoprotein G. | 0.999 |
PBRA_003752 | PBRA_004937 | A0A0G4IIE7 | A0A0G4ILY3 | Sm domain-containing protein. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
PBRA_003752 | PBRA_007984 | A0A0G4IIE7 | A0A0G4IY56 | Sm domain-containing protein. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.993 |
PBRA_003752 | PBRA_008205 | A0A0G4IIE7 | A0A0G4IZU7 | Sm domain-containing protein. | Sm domain-containing protein. | 0.993 |
PBRA_003752 | PBRA_008257 | A0A0G4IIE7 | A0A0G4J034 | Sm domain-containing protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
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