STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_003918MULE domain-containing protein. (471 aa)    
Predicted Functional Partners:
PBRA_006491
SANT domain-containing protein.
    
 0.834
PBRA_008183
Uncharacterized protein.
    
 0.824
PBRA_006005
Uncharacterized protein.
    
 0.815
PBRA_004218
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.801
PBRA_003175
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.801
PBRA_007067
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.774
PBRA_003170
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.774
PBRA_001820
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.766
PBRA_008949
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.766
PBRA_002740
TAF domain-containing protein.
    
 0.750
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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