STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_004109Uncharacterized protein. (81 aa)    
Predicted Functional Partners:
PBRA_005599
Uncharacterized protein.
    
 0.871
PBRA_006375
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.
    
 0.796
PBRA_007139
zf-Tim10_DDP domain-containing protein.
   
 0.775
PBRA_008139
zf-Tim10_DDP domain-containing protein.
   
 
 0.700
PBRA_003999
Uncharacterized protein.
    
 
 0.509
PBRA_009281
Uncharacterized protein.
    
 0.494
PBRA_004517
Uncharacterized protein.
    
 0.493
PBRA_005581
DAGKc domain-containing protein.
    
 0.493
PBRA_008345
DAGKc domain-containing protein.
    
 0.493
PBRA_008348
Uncharacterized protein.
    
 0.493
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.