STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_004011Uncharacterized protein. (704 aa)    
Predicted Functional Partners:
PBRA_001772
Uncharacterized protein.
 
 0.999
PBRA_003912
Uncharacterized protein.
   
 0.928
PBRA_005341
Pyruvate carboxyltransferase domain-containing protein.
 
 
 0.919
PBRA_006029
PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
 0.916
PBRA_008716
BPL/LPL catalytic domain-containing protein.
   
 0.915
PBRA_004032
Uncharacterized protein.
  
 0.886
PBRA_008698
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.875
PBRA_005096
Uncharacterized protein.
  
 
 0.872
PBRA_000543
Transket_pyr domain-containing protein.
  
 0.843
PBRA_000674
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 0.832
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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