Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MED10 | PBRA_004881 | A0A0G4J382 | A0A0G4IM82 | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.974 |
MED10 | PBRA_005397 | A0A0G4J382 | A0A0G4INA2 | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.998 |
MED10 | PBRA_009653 | A0A0G4J382 | A0A0G4IJX5 | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Reverse transcriptase domain-containing protein. | 0.568 |
PBRA_000565 | PBRA_003384 | A0A0G4IPU6 | A0A0G4J8E1 | dUTPase domain-containing protein. | Uncharacterized protein. | 0.543 |
PBRA_000565 | PBRA_009653 | A0A0G4IPU6 | A0A0G4IJX5 | dUTPase domain-containing protein. | Reverse transcriptase domain-containing protein. | 0.591 |
PBRA_002599 | PBRA_003384 | A0A0G4J561 | A0A0G4J8E1 | MPN domain-containing protein. | Uncharacterized protein. | 0.999 |
PBRA_002599 | PBRA_006212 | A0A0G4J561 | A0A0G4IRY6 | MPN domain-containing protein. | HHH_2 domain-containing protein. | 0.951 |
PBRA_002599 | PBRA_009653 | A0A0G4J561 | A0A0G4IJX5 | MPN domain-containing protein. | Reverse transcriptase domain-containing protein. | 0.585 |
PBRA_003282 | PBRA_009653 | A0A0G4J8L2 | A0A0G4IJX5 | CRC domain-containing protein. | Reverse transcriptase domain-containing protein. | 0.590 |
PBRA_003384 | PBRA_000565 | A0A0G4J8E1 | A0A0G4IPU6 | Uncharacterized protein. | dUTPase domain-containing protein. | 0.543 |
PBRA_003384 | PBRA_002599 | A0A0G4J8E1 | A0A0G4J561 | Uncharacterized protein. | MPN domain-containing protein. | 0.999 |
PBRA_003384 | PBRA_003513 | A0A0G4J8E1 | A0A0G4J942 | Uncharacterized protein. | Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.543 |
PBRA_003384 | PBRA_006212 | A0A0G4J8E1 | A0A0G4IRY6 | Uncharacterized protein. | HHH_2 domain-containing protein. | 0.999 |
PBRA_003384 | PBRA_009653 | A0A0G4J8E1 | A0A0G4IJX5 | Uncharacterized protein. | Reverse transcriptase domain-containing protein. | 0.950 |
PBRA_003513 | PBRA_003384 | A0A0G4J942 | A0A0G4J8E1 | Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. | Uncharacterized protein. | 0.543 |
PBRA_003513 | PBRA_009653 | A0A0G4J942 | A0A0G4IJX5 | Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. | Reverse transcriptase domain-containing protein. | 0.591 |
PBRA_004881 | MED10 | A0A0G4IM82 | A0A0G4J382 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.974 |
PBRA_004881 | PBRA_005397 | A0A0G4IM82 | A0A0G4INA2 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.990 |
PBRA_004881 | PBRA_009653 | A0A0G4IM82 | A0A0G4IJX5 | Uncharacterized protein. | Reverse transcriptase domain-containing protein. | 0.570 |
PBRA_005397 | MED10 | A0A0G4INA2 | A0A0G4J382 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.998 |
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