STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_004386Ubiquitin carboxyl-terminal hydrolase. (990 aa)    
Predicted Functional Partners:
PBRA_002626
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.643
PBRA_006248
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.642
PBRA_006309
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.638
PBRA_008025
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.638
PBRA_002349
Ubiquitin-like domain-containing protein.
    
 0.636
PBRA_003609
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.635
PBRA_004336
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.634
PBRA_003290
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.628
PBRA_000236
Ubiquitin-like domain-containing protein.
    
  0.625
PBRA_006810
Ubiquitin-like domain-containing protein.
    
  0.625
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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