STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_004760EHN domain-containing protein. (421 aa)    
Predicted Functional Partners:
PBRA_005536
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.816
PBRA_000171
Uncharacterized protein.
    
 0.814
PBRA_004830
Uncharacterized protein; Belongs to the GST superfamily.
   
 0.765
PBRA_004866
GFO_IDH_MocA domain-containing protein.
   
 
 0.761
PBRA_004032
Uncharacterized protein.
    
 0.751
PBRA_005096
Uncharacterized protein.
  
 0.723
PBRA_001878
Uncharacterized protein.
  
 0.715
PBRA_002653
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
 0.715
PBRA_001132
Uncharacterized protein; Belongs to the GST superfamily.
     
 0.707
PBRA_008563
ATP_transf domain-containing protein.
   
 0.660
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.