STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_004869ACT_7 domain-containing protein. (308 aa)    
Predicted Functional Partners:
PBRA_000961
WD_REPEATS_REGION domain-containing protein.
    
 0.827
PBRA_004428
Uncharacterized protein.
    
 0.794
PBRA_000494
WD_REPEATS_REGION domain-containing protein.
    
 0.783
PBRA_005767
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
     
 0.778
PBRA_008522
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
     
 0.710
PBRA_003086
Mitochondrial inner membrane protease subunit.
     
 0.579
PBRA_002302
Uncharacterized protein.
     
 0.549
PBRA_005123
Uncharacterized protein.
     
 0.546
PBRA_002386
Uncharacterized protein.
     
 0.530
PBRA_004066
Uncharacterized protein.
     
 0.527
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.