STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_005230Uncharacterized protein. (4348 aa)    
Predicted Functional Partners:
PBRA_006791
Uncharacterized protein.
    
 0.804
PBRA_005041
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.758
PBRA_007021
Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
 0.758
PBRA_007660
Dynactin domain-containing protein.
   
 0.747
PBRA_001939
WD_REPEATS_REGION domain-containing protein.
  
 0.746
PBRA_002238
WD_REPEATS_REGION domain-containing protein.
  
 0.724
PBRA_001508
Dynein light chain roadblock.
    
 0.714
PBRA_008831
Robl_LC7 domain-containing protein.
    
 0.714
PBRA_006800
Uncharacterized protein.
    
 0.705
PBRA_002409
Uncharacterized protein.
    
 0.705
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.