STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_000902ABC transporter domain-containing protein. (553 aa)    
Predicted Functional Partners:
PBRA_004721
Uncharacterized protein.
   
0.534
PBRA_005455
Uncharacterized protein.
   
 0.534
PBRA_007348
Uncharacterized protein.
   
 0.534
PBRA_008883
Uncharacterized protein.
   
 0.534
PBRA_003113
Uncharacterized protein.
   
 0.534
PBRA_003380
Uncharacterized protein.
   
 0.534
PBRA_009474
Uncharacterized protein.
   
 0.534
PBRA_003379
Uncharacterized protein.
   
 0.534
PBRA_003614
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.517
PBRA_000941
Uncharacterized protein.
    
 0.508
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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