Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_006150Tr-type G domain-containing protein. (644 aa)    
Predicted Functional Partners:
PBRA_009540
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.786
PBRA_006248
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.785
PBRA_004156
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.783
PBRA_008963
Ribosomal_L18_c domain-containing protein.
   
 
 0.774
PBRA_004347
Uncharacterized protein.
  
 
 0.770
PBRA_007403
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.770
PBRA_008486
Uncharacterized protein.
  
 
 0.767
PBRA_004955
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.766
PBRA_003726
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.761
PBRA_004759
Ribosomal_S10 domain-containing protein.
   
 
 0.761
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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