STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_006193Uncharacterized protein. (664 aa)    
Predicted Functional Partners:
PBRA_002848
E2F_TDP domain-containing protein.
   
 0.999
PBRA_002755
Uncharacterized protein.
   
 0.971
PBRA_002880
Uncharacterized protein.
   
 0.971
PBRA_007067
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.894
PBRA_003170
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.894
PBRA_001373
MRG domain-containing protein.
    
 
 0.884
PBRA_000126
Protein kinase domain-containing protein.
   
 0.878
PBRA_000269
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.878
PBRA_002604
Uncharacterized protein.
   
 0.878
PBRA_004449
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.877
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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