STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRA_006274Dihydrolipoyl dehydrogenase. (486 aa)    
Predicted Functional Partners:
PBRA_000674
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
 
 0.981
PBRA_006271
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
 
 0.981
PBRA_003366
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
 
 0.976
PBRA_007253
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 
 
 0.961
PBRA_004612
Uncharacterized protein.
 
 0.952
PBRA_003642
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
 
 0.938
PBRA_004780
Transket_pyr domain-containing protein.
  
 0.936
PBRA_003727
Lipoyl-binding domain-containing protein.
  
 0.926
PBRA_000543
Transket_pyr domain-containing protein.
 
 0.924
PBRA_000984
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
  
 0.917
Your Current Organism:
Plasmodiophora brassicae
NCBI taxonomy Id: 37360
Other names: P. brassicae
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